Unreviewed - Annotation score: While the tree is loading, you can safely switch away from this tab but if you browse away from the family page entirely, the tree will not be loaded. Some species in the taxonomic tree may not have one or more of the main eight levels that we display. We also count the number of unique sequences on which each domain is found, which is shown in green. Each row contains the following information:.
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Where space allows, the name of the taxonomic level will be written on the grdg itself. We use the NCBI species tree to group organisms according to their taxonomy and this forms greb structure of the displayed tree.
It shows each node in the tree as a separate arc, arranged radially with the superkingdoms at the centre and the species arrayed around the outermost ring.
As we move to using Wikipedia as our main source of annotation, the contents of this tab will be gradually replaced by the Wikipedia tab. For large species trees, you may see blank regions in the outer layers of the sunburst.
trdb Sunburst Tree Sunburst controls Hide. We make a range of alignments for each Pfam-A family. The algorithm is described in the ISO standard. Each row contains the following information:.
Pfam: Family: GRDB (PF)
This value is shown in the pink boxes. Comments or questions on the site?
June 28, Last modified: This family represents a conserved region approximately residues long within the selenoprotein B component of the bacterial glycine, sarcosine and betaine reductase complexes. Surfaces Toric log del Pezzo surfaces Toric l-reflexive surfaces K3 surfaces or big table Elliptic K3 surfaces 3-folds Fano 3-folds or big table Toric terminal Fano 3-folds Toric canonical Fano 3-folds 3d Minkowski period sequences or big table Calabi-Yau 3-fold hypersurfaces Calabi-Yau 3-orbifolds Canonical 3-folds.
Application of 3D-Jury, GRDB, and Verify3D in fold recognition.
Database of comparative protein structure models More Furthermore, we have found that Internet Explorer can become unresponsive when viewing some trees, regardless of their size. An integrated, sustainable and profitable industry producing and marketing rice for the benefit of all Guyanese.
Loading page components …. Unreviewed - Annotation score: This is version 64 of the entry grdbb version 2 of the sequence.
The quality Control Department carries out the statutory functions of the Board that relate to grading. Systems used to automatically annotate proteins with high accuracy:.
Glycine reductase complex component B gamma subunit (Selenocysteine)
Since we cannot determine the lineage for these unmapped species, we show all levels between the superkingdom and the species as "uncategorised". Finally, we group sequences from the same organism according to the NCBI code that is assigned by UniProtallowing us to count the number of distinct sequences on which the domain grxb found.
We show the species tree in one of two ways. You can also choose to see all sequences which have a given architecture by clicking on the Show link in each row.
The graphic that is shown by default represents the longest sequence with a given architecture. This chart is a modified "sunburst" visualisation of the species tree for this family.
Graded Ring Database
Your basket is currently empty. Automatic assertion inferred from database entries i. Purification and characterization of protein PB of betaine reductase and its relationship to the corresponding proteins glycine reductase and sarcosine reductase from Eubacterium acidaminophilum. If you pause over an arc, a tooltip will be shown, giving the name of the taxonomic level in the title and a summary of the number of sequences and species below that node in the tree.
Grxb bacterial grcb archaeal genome annotation project More Vella Briffa B Number in seed: You can use the tree controls to manipulate how the interactive tree is displayed:
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